Attributes of class 'SimpleEntity'

Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
__is_ghost 1 OTHER N/A DatabaseObject   ENUM('TRUE')
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
authored 1 INSTANCE InstanceEdit PhysicalEntity   INTEGER(10) UNSIGNED
compartment + INSTANCE EntityCompartment PhysicalEntity ALL INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
crossReference + INSTANCE DatabaseIdentifier PhysicalEntity   INTEGER(10) UNSIGNED
definition 1 TEXT N/A PhysicalEntity   TEXT
edited + INSTANCE InstanceEdit PhysicalEntity   INTEGER(10) UNSIGNED
figure + INSTANCE Figure PhysicalEntity   INTEGER(10) UNSIGNED
goCellularComponent 1 INSTANCE GO_CellularComponent PhysicalEntity   INTEGER(10) UNSIGNED
hasDomain + INSTANCE PhysicalEntity   INTEGER(10) UNSIGNED
inferredFrom + INSTANCE PhysicalEntity PhysicalEntity   INTEGER(10) UNSIGNED
inferredTo + INSTANCE PhysicalEntity PhysicalEntity   INTEGER(10) UNSIGNED
literatureReference + INSTANCE LiteratureReference PhysicalEntity   INTEGER(10) UNSIGNED
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
name + TEXT N/A PhysicalEntity   TEXT
referenceEntity + INSTANCE ReferenceMolecule SimpleEntity ALL INTEGER(10) UNSIGNED
reviewed + INSTANCE InstanceEdit PhysicalEntity   INTEGER(10) UNSIGNED
revised + INSTANCE InstanceEdit PhysicalEntity   INTEGER(10) UNSIGNED
shortName 1 TEXT N/A PhysicalEntity   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED
summation + INSTANCE Summation PhysicalEntity   INTEGER(10) UNSIGNED

Referers of class 'SimpleEntity' instances

Class name Attribute name Cardinality
Reaction entityOnOtherCell +
ReactionlikeEvent entityOnOtherCell +
Complex entityOnOtherCell +
Depolymerisation entityOnOtherCell +
Polymerisation entityOnOtherCell +
BlackBoxEvent entityOnOtherCell +
Complex hasComponent +
ComplexDomain hasComponent +
ConcurrentEventSet focusEntity +
DefinedSet inferredTo +
EntityWithAccessionedSequence inferredTo +
GenomeEncodedEntity inferredTo +
CandidateSet inferredTo +
OtherEntity inferredTo +
Polymer inferredTo +
EntitySet inferredTo +
SimpleEntity inferredTo +
Complex inferredTo +
OpenSet inferredTo +
PhysicalEntity inferredTo +
SimpleEntity inferredFrom +
EntitySet inferredFrom +
OpenSet inferredFrom +
Complex inferredFrom +
PhysicalEntity inferredFrom +
DefinedSet inferredFrom +
EntityWithAccessionedSequence inferredFrom +
GenomeEncodedEntity inferredFrom +
CandidateSet inferredFrom +
OtherEntity inferredFrom +
Polymer inferredFrom +
_Deleted replacementInstances +
ReactionlikeEvent output +
Reaction output +
Polymerisation output +
BlackBoxEvent output +
Depolymerisation output +
CatalystActivity physicalEntity 1
Reaction input +
ReactionlikeEvent input +
Depolymerisation input +
BlackBoxEvent input +
Polymerisation input +
Polymer repeatedUnit +
PositiveRegulation regulator 1
Requirement regulator 1
NegativeRegulation regulator 1
Regulation regulator 1
VertexSearchableTerm termProvider +
CandidateSet hasCandidate +
OpenSet hasMember +
CandidateSet hasMember +
EntitySet hasMember +
DefinedSet hasMember +
Depolymerisation requiredInputComponent +
Polymerisation requiredInputComponent +
BlackBoxEvent requiredInputComponent +
Reaction requiredInputComponent +
ReactionlikeEvent requiredInputComponent +
CatalystActivity activeUnit +
EntityVertex representedInstance 1

Sidebar on the left shows the hierarchy of FlyReactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.