Attributes of class 'Reaction'

Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
__is_ghost 1 OTHER N/A DatabaseObject   ENUM('TRUE')
_displayName 1 TEXT N/A DatabaseObject   TEXT
_doRelease 1 OTHER N/A Event   ENUM('TRUE','FALSE')
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
authored 1 INSTANCE InstanceEdit Event   INTEGER(10) UNSIGNED
catalystActivity 1 INSTANCE CatalystActivity ReactionlikeEvent ALL INTEGER(10) UNSIGNED
compartment + INSTANCE Compartment Event   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
crossReference + INSTANCE DatabaseIdentifier Event   INTEGER(10) UNSIGNED
definition 1 TEXT N/A Event   TEXT
edited + INSTANCE InstanceEdit Event   INTEGER(10) UNSIGNED
entityOnOtherCell + INSTANCE PhysicalEntity ReactionlikeEvent   INTEGER(10) UNSIGNED
evidenceType 1 INSTANCE EvidenceType Event   INTEGER(10) UNSIGNED
figure + INSTANCE Figure Event   INTEGER(10) UNSIGNED
goBiologicalProcess 1 INSTANCE GO_BiologicalProcess Event   INTEGER(10) UNSIGNED
hasMember + INSTANCE ReactionlikeEvent ReactionlikeEvent   INTEGER(10) UNSIGNED
inferredFrom + INSTANCE Event Event   INTEGER(10) UNSIGNED
input + INSTANCE PhysicalEntity ReactionlikeEvent ALL INTEGER(10) UNSIGNED
isChimeric 1 OTHER N/A ReactionlikeEvent   ENUM('TRUE','FALSE')
keywords 1 TEXT N/A Event   TEXT
literatureReference + INSTANCE LiteratureReference Event   INTEGER(10) UNSIGNED
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
name + TEXT N/A Event   TEXT
orthologousEvent + INSTANCE Event Event   INTEGER(10) UNSIGNED
output + INSTANCE PhysicalEntity ReactionlikeEvent ALL INTEGER(10) UNSIGNED
precedingEvent + INSTANCE Event Event   INTEGER(10) UNSIGNED
releaseDate 1 OTHER N/A Event   date
requiredInputComponent + INSTANCE PhysicalEntity
Domain
ReactionlikeEvent   INTEGER(10) UNSIGNED
reverseReaction 1 INSTANCE Reaction Reaction   INTEGER(10) UNSIGNED
reviewed + INSTANCE InstanceEdit Event   INTEGER(10) UNSIGNED
revised + INSTANCE InstanceEdit Event   INTEGER(10) UNSIGNED
species + INSTANCE Species Event   INTEGER(10) UNSIGNED
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED
summation + INSTANCE Summation Event   INTEGER(10) UNSIGNED

Referers of class 'Reaction' instances

Class name Attribute name Cardinality
NegativeRegulation regulatedEntity 1
PositiveRegulation regulatedEntity 1
Regulation regulatedEntity 1
Requirement regulatedEntity 1
ReactionVertex representedInstance 1
BlackBoxEvent hasEvent +
Pathway hasEvent +
Reaction orthologousEvent +
Event orthologousEvent +
Depolymerisation orthologousEvent +
BlackBoxEvent orthologousEvent +
Polymerisation orthologousEvent +
ReactionlikeEvent orthologousEvent +
Pathway orthologousEvent +
FrontPage frontPageItem +
Reaction reverseReaction 1
VertexSearchableTerm termProvider +
ConcurrentEventSet concurrentEvents +
ReactionlikeEvent hasMember +
Depolymerisation hasMember +
BlackBoxEvent hasMember +
Polymerisation hasMember +
Reaction hasMember +
_Deleted replacementInstances +
NegativeRegulation regulator 1
PositiveRegulation regulator 1
Requirement regulator 1
Regulation regulator 1
ReactionlikeEvent inferredFrom +
Pathway inferredFrom +
BlackBoxEvent inferredFrom +
Depolymerisation inferredFrom +
Polymerisation inferredFrom +
Reaction inferredFrom +
Event inferredFrom +
ReactionCoordinates locatedEvent 1
PathwayCoordinates locatedEvent 1
BlackBoxEvent templateEvent 1
Pathway precedingEvent +
ReactionlikeEvent precedingEvent +
Event precedingEvent +
Reaction precedingEvent +
Polymerisation precedingEvent +
Depolymerisation precedingEvent +
BlackBoxEvent precedingEvent +

Sidebar on the left shows the hierarchy of FlyReactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.