Attributes of class 'Reaction'

Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
__is_ghost 1 OTHER N/A DatabaseObject   ENUM('TRUE')
_displayName 1 TEXT N/A DatabaseObject   TEXT
_doRelease 1 OTHER N/A Event   ENUM('TRUE','FALSE')
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
authored 1 INSTANCE InstanceEdit Event   INTEGER(10) UNSIGNED
catalystActivity 1 INSTANCE CatalystActivity ReactionlikeEvent ALL INTEGER(10) UNSIGNED
compartment + INSTANCE Compartment Event   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
crossReference + INSTANCE DatabaseIdentifier Event   INTEGER(10) UNSIGNED
definition 1 TEXT N/A Event   TEXT
edited + INSTANCE InstanceEdit Event   INTEGER(10) UNSIGNED
entityOnOtherCell + INSTANCE PhysicalEntity ReactionlikeEvent   INTEGER(10) UNSIGNED
evidenceType 1 INSTANCE EvidenceType Event   INTEGER(10) UNSIGNED
figure + INSTANCE Figure Event   INTEGER(10) UNSIGNED
goBiologicalProcess 1 INSTANCE GO_BiologicalProcess Event   INTEGER(10) UNSIGNED
hasMember + INSTANCE ReactionlikeEvent ReactionlikeEvent   INTEGER(10) UNSIGNED
inferredFrom + INSTANCE Event Event   INTEGER(10) UNSIGNED
input + INSTANCE PhysicalEntity ReactionlikeEvent ALL INTEGER(10) UNSIGNED
isChimeric 1 OTHER N/A ReactionlikeEvent   ENUM('TRUE','FALSE')
keywords 1 TEXT N/A Event   TEXT
literatureReference + INSTANCE LiteratureReference Event   INTEGER(10) UNSIGNED
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
name + TEXT N/A Event   TEXT
orthologousEvent + INSTANCE Event Event   INTEGER(10) UNSIGNED
output + INSTANCE PhysicalEntity ReactionlikeEvent ALL INTEGER(10) UNSIGNED
precedingEvent + INSTANCE Event Event   INTEGER(10) UNSIGNED
releaseDate 1 OTHER N/A Event   date
requiredInputComponent + INSTANCE Domain
ReactionlikeEvent   INTEGER(10) UNSIGNED
reverseReaction 1 INSTANCE Reaction Reaction   INTEGER(10) UNSIGNED
reviewed + INSTANCE InstanceEdit Event   INTEGER(10) UNSIGNED
revised + INSTANCE InstanceEdit Event   INTEGER(10) UNSIGNED
species + INSTANCE Species Event   INTEGER(10) UNSIGNED
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED
summation + INSTANCE Summation Event   INTEGER(10) UNSIGNED

Referers of class 'Reaction' instances

Class name Attribute name Cardinality
FrontPage frontPageItem +
_Deleted replacementInstances +
BlackBoxEvent templateEvent 1
BlackBoxEvent precedingEvent +
Pathway precedingEvent +
Event precedingEvent +
ReactionlikeEvent precedingEvent +
Depolymerisation precedingEvent +
Polymerisation precedingEvent +
Reaction precedingEvent +
Polymerisation inferredFrom +
Reaction inferredFrom +
BlackBoxEvent inferredFrom +
Pathway inferredFrom +
Depolymerisation inferredFrom +
Event inferredFrom +
ReactionlikeEvent inferredFrom +
Pathway hasEvent +
BlackBoxEvent hasEvent +
NegativeRegulation regulatedEntity 1
Regulation regulatedEntity 1
PositiveRegulation regulatedEntity 1
Requirement regulatedEntity 1
ConcurrentEventSet concurrentEvents +
ReactionCoordinates locatedEvent 1
PathwayCoordinates locatedEvent 1
Reaction orthologousEvent +
Polymerisation orthologousEvent +
BlackBoxEvent orthologousEvent +
Pathway orthologousEvent +
Event orthologousEvent +
ReactionlikeEvent orthologousEvent +
Depolymerisation orthologousEvent +
PositiveRegulation regulator 1
Requirement regulator 1
NegativeRegulation regulator 1
Regulation regulator 1
VertexSearchableTerm termProvider +
Reaction reverseReaction 1
ReactionVertex representedInstance 1
Depolymerisation hasMember +
ReactionlikeEvent hasMember +
BlackBoxEvent hasMember +
Polymerisation hasMember +
Reaction hasMember +

Sidebar on the left shows the hierarchy of FlyReactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.